dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01292
Location and strand information: 117742 - 120597 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01293
Location and strand information: 120636 - 122576 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01294
Location and strand information: 122624 - 125815 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01295
Location and strand information: 126223 - 128523 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01296
Location and strand information: 128544 - 131738 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01297
Location and strand information: 132714 - 133844 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9254
Protein molecular weight: 42805.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01298
Location and strand information: 133916 - 136009 (-)
Family: GH42
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.7793
Protein molecular weight: 80409.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01299
Location and strand information: 136031 - 137014 (-)
Family: GH43_18|GH43|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.6342
Protein molecular weight: 37678.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01300
Location and strand information: 137219 - 140104 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 8.358
Protein molecular weight: 110583.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01301
Location and strand information: 140119 - 141393 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1159
Protein molecular weight: 48103.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01302
Location and strand information: 141422 - 142906 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2029
Protein molecular weight: 55004.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01303
Location and strand information: 142899 - 143630 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01304
Location and strand information: 143639 - 144469 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01305
Location and strand information: 144466 - 145854 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4075
Protein molecular weight: 50960.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01306
Location and strand information: 145950 - 147989 (+)
Family: null
Protein type: null
Protein description: Methionine--tRNA ligase

Gene clsuter ID: MGYG000003064_4|CGC1
Gene ID: MGYG000003064_01307
Location and strand information: 148016 - 149461 (+)
Family: 2.A.66.2.6
Protein type: TC
Protein description: Teichuronic acid biosynthesis protein TuaB

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003064_01297	GH105_e14\|3.2.1.172	pectin
MGYG000003064_01298	GH42_e7
MGYG000003064_01299	GH43_e26\|CBM32_e74\|3.2.1.55	xylan
MGYG000003064_01300	GH2_e63\|3.2.1.23	beta-galactan
MGYG000003064_01301	CE12_e46
MGYG000003064_01302	GH28_e26\|3.2.1.-	pectin
MGYG000003064_01305	GH28_e52\|3.2.1.-	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003064_01292	TonB-dependent receptor SusC	TC	117742	120597	-	1.B.14.6.1
MGYG000003064_01293	hypothetical protein	null	120636	122576	-	SusD-like_3\| SusD_RagB
MGYG000003064_01294	hypothetical protein	TC	122624	125815	-	1.B.14.6.1
MGYG000003064_01295	hypothetical protein	null	126223	128523	-	SusD-like_3\| SusD_RagB
MGYG000003064_01296	TonB-dependent receptor SusC	TC	128544	131738	-	1.B.14.6.1
MGYG000003064_01297	hypothetical protein	CAZyme	132714	133844	+	GH105
MGYG000003064_01298	Beta-galactosidase	CAZyme	133916	136009	-	GH42
MGYG000003064_01299	hypothetical protein	CAZyme	136031	137014	-	GH43_18\| GH43\| CBM32
MGYG000003064_01300	Beta-galactosidase	CAZyme	137219	140104	+	GH2
MGYG000003064_01301	hypothetical protein	CAZyme	140119	141393	+	CE12
MGYG000003064_01302	hypothetical protein	CAZyme	141422	142906	+	GH28
MGYG000003064_01303	hypothetical protein	null	142899	143630	+	DUF4450
MGYG000003064_01304	hypothetical protein	null	143639	144469	+	No domain
MGYG000003064_01305	hypothetical protein	CAZyme	144466	145854	+	GH28
MGYG000003064_01306	Methionine--tRNA ligase	null	145950	147989	+	tRNA-synt_1g\| Anticodon_3\| tRNA_bind
MGYG000003064_01307	Teichuronic acid biosynthesis protein TuaB	TC	148016	149461	+	2.A.66.2.6
Protein ID	Protein Name	Type	Start	End	Strand	Signature